rs46073848 SNP Detail

Summary

• ID
  rs46073848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127684796 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATATAAACA CCTTAAAGGA
  CAAGGGTTCA TTTTGGCTCA CTGGTTGGGA TTTAGGATGC AGAGGGCATG GGAGAGAAGT
  TTACATCAGG CAGCCAGAGC AGACAAAAGA GGCCTCTAGG AAGGGGTTTT CCTCAGCTCC
  CAGTGTTATC ACATTATGAA TCCATCTGGG TGAGAGCTTT ATGATCTACC TCTAACCTTC
  Y
  GTGACCTTGC AGACTACCCA GAGGTATGTT TTACCAGTGT TCTAGGCATT CCCCTTTAAA
  CAGAGTCTCA CTCACACACA GTCTAAACTG ACCTTGAACT CACTGTGTAG CCCGGGCTAG
  CATGACAAAT GTGCACTACA GAACCGAGTT TTCTCTCTTT CTTGATCCAG TCATGTTGCC
  AGTCACAACC ACTCATTCCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135874331	ENSMUSSNP3967814	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss320957941	CHEV_3_127594065	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46073848					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127684796 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584892	regulatory region 584892	1223 bp distal
Rr584893	regulatory region 584893	826 bp distal
Rr584894	regulatory region 584894	within coordinates