rs46070109 SNP Detail

Summary

• ID
  rs46070109
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:118429888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACCATTAAG AAAAAGAAAG AAGACACATG AGACCCACTG
  GTAAAACAAG GAATGGAGGG TCAAGGGTGA AAGAAATGTC TGGGGCAAAA AAAAAAAGAC
  R
  AGTTCACATG GGCTGGTGAA AAATCAGTCA GGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGCGCGCGCA GGCTTGCGCA TCTATATGTG TGCACATGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss133582752	ENSMUSSNP4687397	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss321924498	CHEV_6_118402945	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46070109					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:118429888 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr637480	regulatory region 637480			1460 bp proximal
Zfp248	zinc finger protein 248			Intron
				Noncoding-Transcript-Variant