rs46063769 SNP Detail

Summary

• ID
  rs46063769
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38700444 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGTCTAGG GTAACTGGCC
  TGGAGGGAGG GCGATTCTTT TTTTTTTTTT TCTTTTAAAT TGGATATTTT CTTTATTTAC
  ATTTTAAATG TTCTTCCCTT TCCAGGTCTC CCCTTCGGAA ACCCCCTAAC TCATCCCCCT
  CCTCCTTCCT CTATGAGGGT TCTTCCCCAC CCACCCACCC ACTCCTGTCT TCCCTCCCTG
  R
  CATTCCCCTA CACTGGGGCA TCGAACACCC TCAGGCCCAA GGGCCTGTCC TCTCACTAAT
  GTCGAACATC TCGCTGATGT CGAACAAGGC CATTCTCTGC CACATATCTG GCTCTACCCA
  TGGGTCCCTC CATGTGTATT CTTTGGTTGG TGGTCCAGTC CCTGAGAGCT CCAGGGGGCC
  TGGGCGGTTG ACACTGTTGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss134840395	ENSMUSSNP5259685	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss320721223	CHEV_3_38545217	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46063769					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38700444 () rs orientation: forward

Symbol	Name	Function Class
Rr575691	regulatory region 575691	1559 bp proximal