rs46059877 SNP Detail

Summary

• ID
  rs46059877
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37842101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTGT TGCTGGAATG TTCGCAGTGA
  R
  CACAGAGAAG CACACGTACC TTTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134813995	ENSMUSSNP4308673	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss320712802	CHEV_3_37686874	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46059877					SNP	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37842101 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	831 bp distal
Rr575565	regulatory region 575565	399 bp proximal
Rr575566	regulatory region 575566	1370 bp proximal