rs46051278 SNP Detail

Summary

• ID
  rs46051278
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109324791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAAATCA ACAGTGATTC
  ATTCCATGAC CTAAGAAAGC TATAACCTAA TCAACAGAAC TATCAATGTA TGAACACAAA
  AGGATTAAAT GAAGCAAGTT TTAGAAATGT CATTTTTTTT AAAAGTTAGG CTTTCAGGCT
  TTGCACCCCT GTAAGACTGA AGGAGGACAA GCTCCCTTAG TTCTAGCCCA CCTTGGGCTA
  Y
  AGTGAAACTA TATCTTTAAA AAAGTTTAAA AAAAAGTTGG TTTGTTGTTC TGGGACAAGC
  TTATATTGAT GATTTAATAC AAAGTACAGT TGTATATCCT AAACTTTTTA ATTTTTAATT
  AAAAAAACTT TTTAGACAGG GTCTTTCTAC ATAGCCCTGG CTGCCTGGAA TTCACAAGGA
  TCTCTGTCTC CCAAGTGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147197960	ENSMUSSNP7176199	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46051278					SNP	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109324791 () rs orientation: forward

Symbol	Name	Function Class
Rnf11	ring finger protein 11	Intron
Rr597331	regulatory region 597331	143 bp proximal