rs46047317 SNP Detail

Summary

• ID
  rs46047317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142247694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTGT TCTCTCACAG GTGCATCCCT
  R
  AAGCATCTGT GTTGGCTGGG ATCTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147756665	ENSMUSSNP7157139	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss321396771	CHEV_4_142111027	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46047317					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142247694 () rs orientation: forward

Symbol	Name	Function Class
Gm70299	predicted gene, 70299	within coordinates
Gm70301	predicted gene, 70301	1657 bp upstream
Rr604089	regulatory region 604089	1060 bp distal