rs46044551 SNP Detail

Summary

• ID
  rs46044551
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83975329 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCTACCCAA CCTCCTTGTA
  TCCTCCTTTA AAAACAAAAA ACAAAAAAAA CCTCATCAAC TCCAATGTAT GCAACCCACA
  TACTCCAGGG GTGCACTCAT CCACTGGAGC ATAACCTACC AAGGCCTTCA CCCTTCCCTC
  CCTCCCTACC CCCTCCCTCC CTTCCAGCAG CCTCCAATTG CCAATAGCTC CTCAAGTGGG
  R
  ATGGGACCTG TGCCCACCTC ACCTCTCTGT ATTGGAATCT TGTCTGGCTT GAGTTTGGGC
  AGTCTGGTGC ATGCTGCCAC AACACTGTGA GAAGGTACGT GCACTGCCCT GTTGTGTCTG
  CAAAACACCG CCTCAGCTTC TTCAGTCTCT CCACCCGCCA TGCCACAAAG TCTAGGGAGG
  GGCAAGTGTG AGATGGATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135420247	ENSMUSSNP2897224	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46044551					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83975329 () rs orientation: forward

Symbol	Name	Function Class
Gm56775	predicted gene, 56775	within coordinates
Rr397735	regulatory region 397735	1155 bp upstream
Rr578973	regulatory region 578973	1740 bp distal
Rr578974	regulatory region 578974	1133 bp proximal
Rr578975	regulatory region 578975	1419 bp proximal