rs46039969 SNP Detail

Summary

• ID
  rs46039969
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174333468 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAATCTCCAT AGGACGTGCT
  AGGAACCTGG TAGAGCAATT CTGACCCTGA TTCAGAAGGC CACATGGAAG AGGATCTCCA
  GAACGGCTCT GAAAAGGCGA AGAGAAGGTC CTGCCCCAAC GGATGGAGCA CCGTGGAATA
  GTTGTCTCAG CTTTGAAAAC ACAGTGATAC TGGATTATAA TGATGGGCAG AGAGAAACGA
  R
  CAGCTTTCAA CCCAGCCTGG CCCGTGTGGC CCATGTGGCC CGTGTGGCCC GGCGTAAAAA
  GGTGGTTTAC ATCAGCTTTT TGGGTCCAAA GGGAGAGGAG GGGGGCAGTG AATGGAATGC
  TGGGATAGGC AGCGAAGAGC CTGGGGGAGG GGGCACATTG GATCACCCCA GGCGATGTGA
  CAAAATCAAC CCAGATCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148344085	ENSMUSSNP883240	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46039969					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174333468 () rs orientation: forward

Symbol	Name	Function Class
Rr572141	regulatory region 572141	1281 bp proximal
Rr572142	regulatory region 572142	1384 bp proximal