rs46027956 SNP Detail

Summary

• ID
  rs46027956
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:119824148 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGAGGCT TTTCCTCATT GACATAAAAC AAAACAAAAC
  AGAAAACTAG CCAGCCTACA TAACTAGTAG AGTAGAACAA CTCTATTAAC TGAAATACCC
  C
  AGTTTGGGGG GGTTTTAGGG GTTTTTTGGC TTTTTTTTTT CAGCTTTCCC ATGACTCATC
  AAATCTGTCA GTGCCTCTTT TGTTTTCTCT TATACACTC                       
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147347544	ENSMUSSNP1473052	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46027956					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119824148 () rs orientation: forward

Symbol	Name	Function Class
Mapkbp1	mitogen-activated protein kinase binding protein 1	Intron
Rr563617	regulatory region 563617	920 bp distal
Rr563618	regulatory region 563618	1882 bp proximal