About   Help   FAQ
rs46005326 SNP Detail
Summary
  • ID
    rs46005326
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr2:143822678 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          AGTGAACTTG CTTCCCTGGG GGATCTATTT ACATTCTGTT
    TGGAGGTAGA AAGGGACAGA GGGACAGAGA AGAAGTGGGA AGAGGGCAAG AAAATGGGGG
    Y
    TTGGGTTTTG AAGAACTCTT ACACAAAGGT GCTCAAAGCA CCTAGGGTTT TGTTCAGAGA
    TTCAAACCCT GACACACAGT TAGCGTCAAA GAACAAAGG                       
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss147776973 ENSMUSSNP1411482 ENSEMBL ENSEMBL_Sanger f SNP T C T
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs46005326 SNP T C T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:143822678 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr373991 regulatory region 373991 1209 bp upstream
Rr566349 regulatory region 566349 7 bp proximal
Rr566350 regulatory region 566350 214 bp proximal
Rr566351 regulatory region 566351 1434 bp proximal
Rrbp1 ribosome binding protein 1 Intron
Noncoding-Transcript-Variant

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
03/18/2025
MGI 6.24
The Jackson Laboratory