rs45992714 SNP Detail

Summary

• ID
  rs45992714
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19946747 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACCCAGGT TAGTCATGAG
  CCTGCCATGT GCAAAAGAAG CATGTGCTCT GGCCACACTC ATGGAATTCC ATGGGGAAGC
  TTCAGGAAAA CTTTCGAGGT TCTCAATAGA ACCAAGGGAG CTCATGGAAC TGGAAGACAG
  CTCTCTGAGG CAAGCTGTTG GGTTTTGATA GCCACAAAGG TTATATGGTG TCTACAGAGG
  R
  CTAGGGGTGT GTCAAAATCA GCTAGAAACT GGTGTTGCTT GCAAAGTAGA AGGATGATCT
  AGAGAAGGAG ATAGAAGAGA TCCAGGCTAG GATCAGGTAA GGCCATGGCA GTGGGGATGG
  GAAGGACATA ATATACAGGC ACAAGCTACC GAGCCTTTTG TTGGGCCCTA TTTGGCCTTG
  GTTTGGGCTC AATTTTTGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss134671174	ENSMUSSNP477309	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45992714					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19946747 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13006	CpG island 13006	1975 bp proximal
Rr574033	regulatory region 574033	1783 bp proximal