rs45991337 SNP Detail

Summary

• ID
  rs45991337
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127764700 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTCTTCA GACACACCAG
  ATCCTATTAC AGATGTGAAC TCAGAACCTC TGGAAGAGCA GTCAGTGCTC TTAACCGCCA
  AGCCATCTCT CCAGCCCTAG TTTCCTATTT TTAAGCAGGT TTGCACCTCT GAAAATTTTG
  GTGCAGAGTT GTTCTTATGG GGTCTCCATT ACCTACCTGG CTGTTTTCTC TTCTCTGGTG
  Y
  TCGCTGGGCT GTACAACCAT TATCGGCCAC TGGGTGGCGC TGAAGCGCCA GGCAAATTAT
  TTGCTGTGGT CAGGCCATCA TTTTGACTTT TAGCCAACAC TAAATGTTAC AGGGAAAGGT
  TACTGACTTC TGCAGTCTTT GAGATACAAT ATTTTATTAT CTGTCCATTT CCCTTGAGTT
  TTTACTTGAC AAAGTCTGAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320958800	CHEV_3_127673969	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs45991337					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127764700 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	within coordinates
Gm65460	predicted gene, 65460	1932 bp upstream
Rr52	regulatory region 52	within coordinates
Rr584913	regulatory region 584913	within coordinates
Rr584914	regulatory region 584914	23 bp proximal