rs45981746 SNP Detail

Summary

• ID
  rs45981746
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147516611 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AAGAACAGAC ATTGTGAGCC AGTGTTAAGC CTTCCATCTT
  TGATCTCCTT CCTTGTTTTG TAGTCTTGCC CAGTGACCGT ATTGCACAAC TTTTGTACAT
  A
  AATGTTATCT GATTCTTAGT CAGTCCTTGA GAGTCTGGGA GAGGTGTCTA GGACTTTACC
  TTAAGTAGAG TTGGTGTTAT AAGACTGAGA TTTCCTCGCT G                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147960050	ENSMUSSNP3236677	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs45981746					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147516611 () rs orientation: forward

Symbol	Name	Function Class
Rr398816	regulatory region 398816	1737 bp downstream
Rr398817	regulatory region 398817	864 bp downstream
Rr398818	regulatory region 398818	1747 bp upstream
Rr604487	regulatory region 604487	1 bp proximal