rs45978957 SNP Detail

Summary

• ID
  rs45978957
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137711237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCC AATGCCCTCT TCTGTTGTGA
  T
  TAAGAGACAG TGTACTCATA TGGGA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147628148	ENSMUSSNP6627315	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321369447	CHEV_4_137539841	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45978957					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137711237 () rs orientation: forward

Symbol	Name	Function Class
Rr602808	regulatory region 602808	1685 bp distal
Rr602809	regulatory region 602809	328 bp proximal
Rr602810	regulatory region 602810	1299 bp proximal