rs45973308 SNP Detail

Summary

• ID
  rs45973308
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55682628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTACTTGAAA GGCAGAAGGA
  GAAAAATTAT GAGTCTGAGG CCAGCCTGGG CTAACATAGC AATACCTTAC TTCTACCCAC
  CTCCTCAAAT CAAGGAAAAA ACTGTTGTGA TTACAGTTGA GTACTTTGCT TTCAAGCCCT
  GGCTTGTCCA CTTCCTGGTT CTATTACACT GGGAGTTTCT TTGCCTGAAA ACCCAGGAAC
  R
  ATGAGTATGC TGAGAGAGGG TGATCCTAGG ACAGGATGCT GATGGTCTTT GCTTTTGTTT
  TTGTCTCATC TCCCTTGTCA ATCAACTAGA AAAAGGTAAC ACTAACAAGG GAGATTATTC
  CTCTGAAAAT GGCCAAATGA TTAATCCTAT GAAATATCCT AGACATAAGA AGAAAGGTAT
  TTTGGTCATG AGCCTAGCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133214633	ENSMUSSNP6069256	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45973308					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55682628 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	846 bp distal
Rr631016	regulatory region 631016	1249 bp distal