rs45964569 SNP Detail

Summary

• ID
  rs45964569
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148044006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATG GCTGCCATGA TCCCCTGTAG
  W
  CTTAGCCTAA TACATTTACT GACAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss147988145	ENSMUSSNP6079684	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
ss321416020	CHEV_4_147333658	CHEVERUD	SCREENING_POP	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs45964569					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148044006 () rs orientation: forward

Symbol	Name	Function Class
Rr604535	regulatory region 604535	691 bp proximal
Rr604536	regulatory region 604536	798 bp proximal