rs45946450 SNP Detail

Summary

• ID
  rs45946450
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121458166 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCTGTGCCT GTGCTTTCTA AGACTTCCTG GGCATTTAAA
  AAGTTTGTGA CTTTATATAA GCCTACCTTA TCTTAAGGAT AAAACAAACC ATTCACTTCG
  M
  TCCCCAACTC CCAAGTTACC TCACCCCCAT TTTTCTCTTA AGGACAGCAG CAAATTTGGG
  GTGCTCTGTC TCAAGTCCCA AATAATTGCT TGTCTTCAG                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss135726067	ENSMUSSNP6447389	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss320904606	CHEV_3_121367435	CHEVERUD	SCREENING_POP	f	SNP			C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs45946450					SNP	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121458166 () rs orientation: forward

Symbol	Name	Function Class
Rr584141	regulatory region 584141	1108 bp distal