rs45937797 SNP Detail

Summary

• ID
  rs45937797
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:150017642 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTGTTCT CAAGAAAACA
  CGTGACTACC CTACAAGAAT GTTCGATGTC CCCGACAATT TGCTGGGTGC TAAGGCACCT
  GATGTCTTTA TCCAGTGCTG ATTTTGTCTC ATTTTAAGGC TGTGCCTCAG TTCTGAGTCT
  GAAGAGTCCC CTGTCCCCAT TCACAAAGTA GGACTTGACC TGCTGCTGGA GTCGGGACAC
  S
  ATCTCCAACT GCTACATCAG GAGATGATTC ACATGGCCCT GGGACAGTGA GATATGGGAC
  CAGTCAAAAC AATCCCGGGA CTTTTGCCTA AATGACCTTC TGAGAAAGGG GTAAAGAAAA
  AAATTAAATT AGATGTTTAA ATAGCAGAGA CACAGTTGCT GACGCCAGGG CTGGAGCCCC
  TGGACTCAGA GACGCCTGAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148043429	ENSMUSSNP1454461	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45937797					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150017642 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr605111	regulatory region 605111			467 bp proximal
Spsb1	splA/ryanodine receptor domain and SOCS box containing 1			Intron
				Noncoding-Transcript-Variant