rs45923849 SNP Detail

Summary

• ID
  rs45923849
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116014419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAATAGACT GAACCTCTGA
  ACCTGTAAGC CAATTAAACC TGTAAGCCCC AATTAAATGC TGTCCTTTAT AAAAAATAAT
  AATAATAAAA ATAAAAAGTA AAAGCATCTC ACGCGGCTGC CAGAGATGTA ACGGCCCATG
  CTTAAGACTT CCTTTACTTA TGTTCAAACT CCCAGGAAAT ACCAAACTGA GTTTTTCTAC
  R
  TGCTGGATGA AATACATTTC AAGCCCACTC TGGAGACTTG AAAAAGGTGT GTGGTGATCT
  CGGGTCTATC GAACAGGGAG GGGCGGCAGA GGAGGGAACA CAGCACACCT CAGACAGCAT
  CTTTAACTGC ATTACACATC TGCCTGGGGC AGGCTCACTG CTCTGAGCCA CTCCTGGCAC
  CTTGGCATTT GCTTTGATAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135669506	ENSMUSSNP4139706	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs45923849					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116014419 () rs orientation: forward

Symbol	Name	Function Class
Rr583673	regulatory region 583673	154 bp proximal
Rr583674	regulatory region 583674	1741 bp proximal