rs45919655 SNP Detail

Summary

• ID
  rs45919655
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:43505023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGCTGCC TGACCTGAAT
  GTTCGATACA TTCTAGGGTT CTCTTAAAAA GCAGGAAGTG TTCTTAACTG CTGAGGCACC
  TCTCAGCACT CCGTTTCTCA TGTATAAAAC CCATTGTGCT GGTGATGCTG GCAGGACAGC
  AGAGTATGAA GTCAGAGAAC ATAAGATAGG GAAAGTTCAG AAAATTTCAA CTATCATTGA
  R
  TTCCTTTGAC ATTCTTAAAC ATTCATCGTT AACAGCTCAA TGAAATGTGT TGGGAACATA
  ATACACTTAA CTTATCTATT GCTCTGTGTG ATATGTAACC GAAAACAATG ATTATTATGC
  AATGAAATTT AAATTGCTAG TTTGCTGTAC TACAAAAATA TGGTTCAATA TTCAAGCAAT
  GTGCTTGATT CGTAATGCAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss52393763	NES15382325	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs45919655					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52393763	NES15382325	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:43505023 () rs orientation: forward

Symbol	Name	Function Class
Tssr113357	transcription start site region 113357	1925 bp upstream