rs45919263 SNP Detail

Summary

• ID
  rs45919263
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:100689050 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGATAAAGGG CTATCATCAA
  TATATACAAA GAACTCAAGA AGTTAGGCTC CAGAGAAGCA AATAATCCTA TTTTTAAAAA
  AAAACCTAGG GTATAGAGCT AAACAGAATT CTCAACTGAG GAAACTCGAA TGGCTGAGAA
  ACACCTAAAG AAATGTTGAA CATCCTTAGT CATCAGAGAA ATACAAATCA AAACAACCCT
  G
  AGATTCTACC TCAAAACAGT CAGAATGACT AAAATCAAAA CCTCAGGTGA CAGCAGATGC
  TGGCAAGGAT TTGGAACACT CCTCCATTGC TGGTGGGAAT GCAAGCTGGT ACAAACCCTC
  TGGAAATCAG TTTGGCAGTT CCTCAGAAAA TTGGATATAG TATTACCTGA GGACCCAGCT
  ATATCACTCC TAGGCATATA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145793955	ENSMUSSNP4177444	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45919263					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:100689050 () rs orientation: forward

Symbol	Name	Function Class
Cachd1	cache domain containing 1	Intron
Rr596037	regulatory region 596037	1855 bp proximal