rs45915096 SNP Detail

Summary

• ID
  rs45915096
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151475034 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACCTTAGAA CCAGTGTACT
  TGCCTAGCCT TCTTATTTTT CTTCTGTATT AAAAGTCTGG TGTTTGCTTG GACAAAATAC
  ATTCAGACTC AGCACTCCCT TGTGTTTGTC AATTCTTGTC GACTCTTTGC CCATCTGTCT
  GAAACCCTGA TTCCACAAGG AATGAGTGAG GCTGACTGGG CCCGGTCTGT GGCAGTAGAG
  M
  ACTTTGAATG TTATAAAAAT CATAAATGTA CTTATTTTAT CAATACATGA ACCCATAGAT
  GAGTTCTTTA CTGAACATGC TGTTAGAAAG TAGTATGTAG ATGGCGGAAG CAGGCCACTG
  GTAATGGACC TTGGAAGACT TTATCTTGTC CCCAGCTCTC CTCAGGCACC ATGATACAAG
  CAGTTCTGTT CCACAATGCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss61100554	NES16600308	PERLEGEN	MM_PANEL2	f	SNP	C	A	C	C		C	C		C
ss321026830	CHEV_3_151432361	CHEVERUD	SCREENING_POP	f	SNP					A			A
SNP Consensus Information
SNP					Consensus Type	AKR/J	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs45915096					SNP	C	A	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61100554	NES16600308	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151475034 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1641 bp proximal
Rr587416	regulatory region 587416	1788 bp proximal
Rr587417	regulatory region 587417	1899 bp proximal