rs45909650 SNP Detail

Summary

• ID
  rs45909650
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:121277183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TAACC ATGGCTCTGC ATGGGCCTGC
  S
  GGCCTGAGGG AGTAGGGTCT GATGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147386306	ENSMUSSNP6337636	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
ss320483199	CHEV_2_121272438	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45909650					SNP	C	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:121277183 () rs orientation: forward

Symbol	Name	Function Class
Gm75262	predicted gene, 75262	within coordinates
Rr563824	regulatory region 563824	1571 bp proximal
Rr563825	regulatory region 563825	1674 bp proximal