rs45877277 SNP Detail

Summary

• ID
  rs45877277
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8495310 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGCCACTGG ACCCTAGTAA
  GAACTTGGTT TTTAACAGGT TTTTAATCAT CATTGGTCCT GTTAACTCCA ATAGCCCACC
  ATGACAGAGA TGACTGCTGT TCTGTGCTGT GCTTCTTTCT TTCTGTGTGC ATGTCCTCTT
  ATCCATGTGT TATTAACACA TCAGAGTCCA AGGGGGAAAG GCACATGCCC CTGTACCCTG
  A
  AAGGATCACT TCCTTGCAGC TTGCTACATA GTTTAAGAGG AAGAAAACCA TTGGTTTAGG
  TCAGGGAGAA CTCTTTGCTA TGCTGAAGTC ATTTTCCCCT GTTCTAACGG TTACCTCAGC
  CAAAGTTGTA GGTCTGTTTC CCCATCTGAA TATGGAGGAT AGTATTCATG GTGTAACTTG
  CGATAAAAAC ATCATAGATT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss132970249	ENSMUSSNP3113817	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45877277					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8495310 () rs orientation: forward

Symbol	Name	Function Class
Gm45062	predicted gene 45062	Intron
Rr626407	regulatory region 626407	1 bp proximal