rs45869818 SNP Detail

Summary

• ID
  rs45869818
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:148217242 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTCCTGTGG TGGGAGAGGG CTGGCTTAGC TTGGCTAGGA
  TATCACTCAA TTGTTTGGGG AGCTTAGGAT ACAGTGATCA AAGGTTCCAA AAGACAACGC
  R
  GTGAACAAGG TTGTGCGGGT CCAGGTAACA GAGCCTTGAG AGGCCCCACA GATTCTTGGC
  CCAATAGAGA GACAAATAAC AAATATCTTG TTTTCAGTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147923766	ENSMUSSNP4728674	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45869818					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:148217242 () rs orientation: forward

Symbol	Name	Function Class
Gm39957	predicted gene, 39957	1008 bp downstream
Rr566886	regulatory region 566886	1080 bp distal
Rr566887	regulatory region 566887	103 bp proximal
Rr566888	regulatory region 566888	188 bp proximal
Rr566889	regulatory region 566889	569 bp proximal