rs45868495 SNP Detail

Summary

• ID
  rs45868495
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147511521 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CCACCTTGTG AGATCCACAG ATCAAACTCA GATTGCAAGT
  CCTGTGATTG TTTGCCTCTA CTGGCTGAGT TATCTCAAGA CTCGAAAATG ATTTTTCTAT
  T
  TAAGTATTTC TATTAAATTT TTTATCTTTT AATTAGCCAA AACATTCTCA TTCTCTTTCT
  GTGTCTCTAT TCCTCTGTCT GTCTCTGACT GTCTGTCTCT G                    
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147959133	ENSMUSSNP3682446	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45868495					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147511521 () rs orientation: forward

Symbol	Name	Function Class
Rr398813	regulatory region 398813	797 bp upstream
Rr398814	regulatory region 398814	1706 bp upstream
Rr604485	regulatory region 604485	845 bp distal
Rr604486	regulatory region 604486	931 bp distal