rs45868264 SNP Detail

Summary

• ID
  rs45868264
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146889497 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGGC AAAAGGAGCC CTGAGGAGCT
  S
  GGGATGGGAG GAGTGCTTAT ACAGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136048052	ENSMUSSNP6214209	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss321011562	CHEV_3_146846706	CHEVERUD	SCREENING_POP	f	SNP			G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45868264					SNP	C	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146889497 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13926	CpG island 13926	1087 bp distal
Gm65492	predicted gene, 65492	within coordinates
Rr375882	regulatory region 375882	1161 bp downstream
Rr587133	regulatory region 587133	1961 bp distal
Rr587134	regulatory region 587134	1126 bp distal
Rr587135	regulatory region 587135	694 bp distal
Rr587136	regulatory region 587136	within coordinates