rs45862477 SNP Detail

Summary

• ID
  rs45862477
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101260578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAGGACA AAGGCCTCGT
  GCTGATCACT GGTAGGACAA ACTCACAACC TCCTGTAACT CCAGCTCATG GCATCCAGCG
  CCCTGTCTGG CCTCTGGGTA CCTGAAGGCA CATGGCATAC AAACATACAT ACATACACAT
  CAATAAAAAT ATTATTTTTA CCTTTGAGGC AGAGTCTCAC TACATAGCCC TGGCTGACTA
  R
  GAACTCTATA TGTAGACCAG GCTGGCCTAG AATTCACAGA GATCCACCTG CTTCCATCTC
  TTGAGTGCTT GAAAAATACA TCTTAAAAAA GAAGACCTAT CCTTGTTCTG AGTAGCTCCA
  TAGTGAAGTG TCACAATGTA TGCGGCTTAC TTTGAAATAC TTTAGCAAAA AAGCACATGT
  ATAAATATGG CTACTTATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	MSM/Ms
ss135546712	ENSMUSSNP449438	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	MSM/Ms
rs45862477					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101260578 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	within coordinates
Rr582017	regulatory region 582017	956 bp proximal
Rr582018	regulatory region 582018	1194 bp proximal