rs45853652 SNP Detail

Summary

• ID
  rs45853652
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:12626505 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGACTAAAA TTACTGTCCT
  TAATTTTTTA ATTTTTAGTT CACAGACCAT TGTTGTTTCA TGATTCACAA TTATGGGAAA
  GAATCCTTAG TTCTTATTCC TCTTGATTGC ATTGACTCTT TATATCTAAT TTGTTCAGTT
  AATAAAGGAG CTGAAGGGGT TTGTAACCCC ATAGGAAGAA TGACAATATC AACCAACCAG
  R
  CCCCCAGAGA TCCCAAGGAC TAAACCACCA ACCAAAGAGT ACACATGGGG GGACCCATGG
  CTCCAGCTGC ATAAGAATCA GAAGATGACC TTATCTGGCA TCAGTGGGAG GGGAGGCCCT
  TGGTCCTGTG AAGGCTTGAT GCCGGGGCAG TGAGGTGGGA GTGGGTGGGT GGGTGGGGGA
  GCACCCTCAT AGAAGCAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss146023306	ENSMUSSNP837116	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs45853652					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:12626505 () rs orientation: forward

Symbol	Name	Function Class
Gm37985	predicted gene, 37985	within coordinates
Rr589092	regulatory region 589092	589 bp proximal
Rr589093	regulatory region 589093	1988 bp proximal