rs45831557 SNP Detail

Summary

• ID
  rs45831557
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165473450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCTGCAGC ATTAAAGACT
  CAGCCTATTT CCTGGGGTTG AGCAGGAGAG GGTTAGACAC CAGGTAACGC TCAAAACAGA
  CTGACTGGGT CATCACTGCC TGGCATACTA GCCCTGTGAC TTGTGACAAA GCAAACCACA
  GGGAAACACC CCCCACCCCC AAGCCAGTTC CTGCCTTTAC AGAGGACCCG GCCACCGGCC
  S
  GCCGATCCAG CTCAGAGATC TTTTTCTAAG TCCATCTACA TAAAGTGGGC TGTTCTCAGC
  CCAGGACTCA CTCTCCTGCT CCAGTCATCT AGGTCAGTGC TTCCCTAATT CCCTAATGCC
  CAGGTCTTTA GCACAGTTCC TCATGTTGTA GAGACCTCCA CCCAGGAAAT GATTTCATTT
  TTACTTCATA ACTATAATTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

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SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss148241924	ENSMUSSNP5466218	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs45831557					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165473450 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569968	regulatory region 569968	1156 bp distal
Rr569969	regulatory region 569969	447 bp proximal
Rr569970	regulatory region 569970	1454 bp proximal