rs45830994 SNP Detail

Summary

• ID
  rs45830994
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101054328 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTGTAAAGC ACTATTTTAT ACAAATAGTG
  TAAAAGTGTA ATAGAAATAA AATCCATAGG ATTTTATTTT TCCATAACAT TTATGTTTTC
  CAAACATTGT CCTATTAATT AGAAAATAAA AGATAAAAAC AAGAATGGAA CCTCAAAATG
  K
  ATATTATGCT TGCTATTTTA TAGATGAGAA AAAGATAACA AGAGGAGAAT CTTCTCAGAG
  CCTTAAAATA gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgg
  tgtgtgtTGG GGGAGGCGGC AATGAGAATC                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135544471	ENSMUSSNP829065	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
ss320851110	CHEV_3_100950935	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs45830994					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101054328 () rs orientation: forward

Symbol	Name	Function Class
Rr581969	regulatory region 581969	283 bp distal