rs45819067 SNP Detail

Summary

• ID
  rs45819067
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52407181 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C AGTTGGAGGC TAACCTGGGC CACATGTTGA GATCCTGTGT
  TAAAGAGATT AACAAATCCC TACACAGTGT GTCATACCTG GCAGTAACTC TCATCCCCTA
  A
  GGCCCTTTGG GGCAGGTAGG ATTAGTAGAT CCACTGTATA GTAGAGAAAG AGGCTTAAAG
  TGATTGTGTA AAGTTTCCAA GACCTCAAGG CTTCTAGGTT C                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss135176561	ENSMUSSNP955210	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs45819067					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52407181 () rs orientation: forward

Symbol	Name	Function Class
Rr576531	regulatory region 576531	589 bp distal
Rr576532	regulatory region 576532	461 bp proximal
Rr576533	regulatory region 576533	1946 bp proximal