rs45804758 SNP Detail

Summary

• ID
  rs45804758
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:122211262 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTCTGTAA AGTCTTACGA
  AATGGTATTC ACATCTTTGA GGCCAGTCAG TTGACATGTG AGCCTACAGT CAGCTCCGTT
  TGTTTGTCAG AAAACAGTAA ACAAAATAAA AGGTCTTTGC TCCAGTGGAG CTTGGAGCTC
  AGCAGAGCTG AGCAGGGTTC CTGCAGTCAG CTGATAGTGC ATTGTGACTG CTGTAGTGCA
  R
  TCTTGGGAGA GTTTACTGTC GTGACTCTGC TGTTACACGT GGCTGTTTAC GAGCTTGCAC
  CCACAGACAA GGCCAGAGCT TTTGAATATT GTGCGATAAC GTCTTCTGCC GGCTCGGACT
  CACAATCCAC TGGAACAAAC TTAATGTTCT GGAACCAGGT CACCTTTTAA AGGCGACTTC
  AAAGCAAAAC TAAACCAGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135741249	ENSMUSSNP6951741	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45804758					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:122211262 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13768	CpG island 13768	1940 bp proximal
Rr397985	regulatory region 397985	1968 bp upstream
Rr584325	regulatory region 584325	1198 bp proximal
Rr584326	regulatory region 584326	1728 bp proximal