rs45766625 SNP Detail

Summary

• ID
  rs45766625
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129896055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGATGATG ATGCTATGAG
  GGTTTTTGCT CGCTTGCTTG CTTGTTTTGG GTTTTTGTAC ATACCCATAG CATCTGTGTA
  TCTACATCCA GAACCGAATC ATGAAATGCC CCAGAAGATG CAGTAAAGAG AAAGTGACTG
  GAGGGATGGC TCAGCCACTA AGAGCACTTT TTGCTTTTGT AGAGGACCCA GGTTTGATTC
  S
  CAGGATCCAC ATGGCAGTTC ACAACTACCT GTCACACTAG ATGCATCCAG GATATCCGAT
  GGCCTCTCTT GGCCTCCCTC GGCACTGTGC AGATGCAATG CACAGACATG CATGCAGGCA
  AGAATAGTTA TACATATATA AAGGGATAAA TAATATTTTA AAATAAAAAA CTATTTGAAG
  ACAGCTGATT CCTGTTTCTC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135891753	ENSMUSSNP1040090	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45766625					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129896055 () rs orientation: forward

Symbol	Name	Function Class
Rr585133	regulatory region 585133	952 bp proximal
Rr585134	regulatory region 585134	1183 bp proximal
Rr585135	regulatory region 585135	1269 bp proximal