rs45754457 SNP Detail

Summary

• ID
  rs45754457
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108071188 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACCACAT AATAGTACAG
  TATCCGATTT TAAAATATCT TTAAATTTTT CTCAGAGTCT GGGGACTAGG GAGCTAGCTC
  ATCCGAGGAG ATTCCCTGTA AGTATAAGTT CAGTAATGTG GGAATGAACC TGTGTTCTGT
  CTCCATAACC CACATAAAAC TCCAGCTGTA ATGAGACATA CTCATAATCG CAGCATTGGA
  R
  GCTGAGGGGC TGGGGACAGG TGAATCTAAA GTCTGAATCT CGGGTTTGCT GGGCACACAA
  ACGTTACTTT TACTTTGTTC TTTTCTATCT ACGAAGAAAG TCATTTGAAA TACTCCAGCC
  CCAGTTTCAG CCCGTAAAGA ATGTTGCTCT GGGGACACAG AGTAAGAATT CACCTCTTGT
  CACAGTGCCA ACCTGCTTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss133494829	ENSMUSSNP1355219	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs45754457					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108071188 () rs orientation: forward

Symbol	Name	Function Class
Rr636032	regulatory region 636032	419 bp distal
Rr636033	regulatory region 636033	1261 bp proximal