rs45753803 SNP Detail

Summary

• ID
  rs45753803
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:84123800 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAAGGGA CAGAATGTCT
  CTGAGCAAAG ATGACAGCTT TTCAGGGCTC AGGAAGGAAG GGGTGGAGGT GGCCTGGCAG
  GTCCATCCTT GAGAGGAAGA GGGAATTGAG TAGGTGGCTT TGGAAGAGAC ACTGAGATCA
  GCTGGCAAGT GCCGACATGT GATGGGAGAG GTGAGACTCT ACAAGTGACC TTGGGTTGCC
  R
  ATCTTGACTT GGGAGAGAAG TTTCCAGGGA AGAGGTGCTG TAGCAAAGGC AGAGGGCAGA
  GAGGAGGAGG CTGGAGGCAG GGGGGAGGAC TCAGAGAAAC AGTGTGGATG GATAGAGAAC
  CCTGGGGTGG GAAGGCAGAT ATGGAAGGAA GGGCAAAGGA CCGGAAGGCT GGGGTGAGAT
  GGGGTCGGGG ACCTGGAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60905079	NES15952137	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs45753803					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60905079	NES15952137	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84123800 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dysf	dysferlin			Intron
				Noncoding-Transcript-Variant
Rr368107	regulatory region 368107			858 bp upstream
Rr633000	regulatory region 633000			42 bp proximal
Rr633001	regulatory region 633001			825 bp proximal
Rr633002	regulatory region 633002			1748 bp proximal
Rr633003	regulatory region 633003			1815 bp proximal