rs45747305 SNP Detail

Summary

• ID
  rs45747305
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127763133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTAAATAT ACACAGACAT
  GGCTTTTACC TGTAGCCAAG CACTTAGTAG GCTGAGGCAG GAGAATTGCT ATGAGTTTGA
  TCTAGCCTGG GCTATATAGT GAGTTCCAGG CTAACATGGG CTACAGAGTG AGACCTTGTC
  TCAAAAAAAA TTATTATCCT AAATAAAAGA ATTAAGAAGT GTCTGGGGAG TGGGGGGCTG
  R
  ACTCCAGATG CCCCCATCTT GACACTGGAC TTGGTCAACC TCACTTTTTC TTTGAAGTGG
  CTCATTGTGA TTACCTTGGG CACATCCTGG GATGAAGGAA GGTGGCCGGG GACACGTGGC
  TCTTGAAACA GCTGGCATAT TTTTCTTGTG TTTTAGGCCC CTCTCAGAGT TTGAATAGAA
  CTGACTTGGT CTACCCTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss135876662	ENSMUSSNP1307775	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320958792	CHEV_3_127672402	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs45747305					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127763133 () rs orientation: forward

Symbol	Name	Function Class
Gm35667	predicted gene, 35667	1437 bp upstream
Gm65460	predicted gene, 65460	365 bp upstream
Rr52	regulatory region 52	497 bp proximal
Rr584913	regulatory region 584913	1490 bp proximal
Rr584914	regulatory region 584914	1590 bp proximal