rs45744278 SNP Detail

Summary

• ID
  rs45744278
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:118405637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAGTGGAGCT GACCCTGATG GCCAGGGCTC AGGTGAACTG
  GCCCCAAGGG TGTGAGCACG GGGGAGCTGG CCCAGCAATT TTTTCCCCCT TTGGTTTTTC
  G
  AGACAGGGTT TCTCTGTATA GCCCTGGCTG TCCTGGAACT CACTTTGTAT GTAGACCAGG
  CTGGCCTCCA ACTCAGAAAT CCGCCTGCCT CTGCCTCCC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss149162328	ENSMUSSNP2706780	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45744278					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:118405637 () rs orientation: forward

Symbol	Name	Function Class
Gm25076	predicted gene, 25076	992 bp downstream
Gm73266	predicted gene, 73266	1671 bp upstream
Rr618847	regulatory region 618847	1059 bp distal
Rr618848	regulatory region 618848	1253 bp proximal
Rr618849	regulatory region 618849	1622 bp proximal
Rr618850	regulatory region 618850	1693 bp proximal