rs45741571 SNP Detail

Summary

• ID
  rs45741571
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137856958 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTCTCT CTTATGTAAT
  GCCCCATAGG CTAGTCTGAT AGAAGCATTT TCACAGTTAA GGGTCCCTCT TCCCAAAGCC
  TAGCTTGTGT CAGGTTAACA TAAAACTAGC GTGCATATAA AGTTAGCCCT GTGGTGCCGT
  GGTGTATGTG CTATGTGATT AGATATAGCT TCTCATGGAG TTGACTGAAC CCAAGCAATA
  Y
  GTTACGGAGA AGAAACAGGT CTGTTCTCAT GCCTGTGCCG TGTGTTTCAG TAATTGAAAT
  AGGATTCTTT TTATAACATG TGTATCTTCT CAACGTGTGT CTGCTGAGCA GTCTGTCAGT
  AGTTGAGTAA TACTATCTTT CCCTTATAGT AAGGACCTCA TTTTTACAAA ACTGGGGCTG
  GAGAGATGGC TCGGTGGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147633661	ENSMUSSNP1062866	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45741571					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137856958 () rs orientation: forward

Symbol	Name	Function Class
Eif4g3	eukaryotic translation initiation factor 4 gamma, 3	Intron
Rr602841	regulatory region 602841	419 bp proximal
Rr602842	regulatory region 602842	606 bp proximal
Rr602843	regulatory region 602843	1607 bp proximal