rs45687943 SNP Detail

Summary

• ID
  rs45687943
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:62366665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGTTTCTC AAGAAAAGTA AAAGAGTATC TCAAGTTTTT
  TTAAATGTTA AAAGAAACTT TATTGGACAA GTGGACACAA AGAAGAATAT TGTAGTTAAA
  S
  TCAACATTAT CCCAGGATCC TGTAGGATGT GTCACTTATT GTGTTAATTT GTTCCCATTG
  ACCAAGGAAT TAGCTATAAT CTATCTTTCG AGGGAGTATG                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss62821700	NES17372934	PERLEGEN	MM_PANEL2	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs45687943					SNP	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62821700	NES17372934	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:62366665 () rs orientation: forward

Symbol	Name	Function Class
Gm52291	predicted gene, 52291	162 bp downstream
Gm65778	predicted gene, 65778	1322 bp upstream