rs45674883 SNP Detail

Summary

• ID
  rs45674883
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:156367886 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AATGTGATA AATTCAGGCA GATAATTAAT
  TTCAATGAAG GAAATCTTGC ATTTCAATTT TTAGGAGGAA ACAAATGTAG AAGAGGCAGA
  TTGGCCTTGG AGAAATAAGA GGAAGGGGGA AATGCATCTT TTGGAGCCAG ATGACTCTGG
  R
  GAGGGCTTGG TAGCCACTCC CTGTCATTTC TCTGTCTAAG GGAGACATCT AGAGGCTGCT
  GGATGGTTCT GTTCTGTCTG TCAGGAAAGG CTTTTCCAGA TGGCTTCCTC ACAGATCCCG
  TCACAAATCA GAGAGCACTG ATCGCAGTGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss145798962	ENSMUSSNP3654801	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
ss320072361	CHEV_1_158470447	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs45674883					SNP	A	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156367886 () rs orientation: forward

Symbol	Name	Function Class
Rr421192	regulatory region 421192	1723 bp distal
Rr421193	regulatory region 421193	302 bp distal
Rr421194	regulatory region 421194	within coordinates