rs45669375 SNP Detail

Summary

• ID
  rs45669375
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131591994 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTGTTGCAG TTGTTGTTGT
  TGCAGTTGTT GTTGTTGTAA TAGTTACATT AAAGTATATT CATCAGCATC ACAATTCAGG
  AAACCTAAAC ATTGATTATA TTTCTATTAT TAGAGAACAC CTTTTCTATT TTCTTTCCCC
  TCCTTTGAAG TGCTTATTCA TCTTGATTTT GTTGCTTAGA TATAAACGTT TCTCACCACT
  M
  AATATTATGA GTAAAATAAA TACTGCCTTT GATTTTTCCT TCTGTCTTAA ACCATTTGAA
  AAATCAGAAC ACTTTTTATC GTCTTGCTGA GAACTCAGGC TTGGTTTTTA GCACATAGTA
  AGTGGCTCAC AGCTGCCTGT AATGTTAGTT CTAGGAAATC TGATACTCTC TTCTGGCCTC
  TTCAGGCATT GCATATGTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135905982	ENSMUSSNP1786812	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45669375					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131591994 () rs orientation: forward

Symbol	Name	Function Class
Gm65547	predicted gene, 65547	1386 bp downstream
Rr585388	regulatory region 585388	351 bp proximal
Rr585389	regulatory region 585389	428 bp proximal