rs45657446 SNP Detail

Summary

• ID
  rs45657446
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:134601617 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCCC ACCGCCTCCC TGCCTTTGCG
  C
  AGGTATGCTT GTTCCGCTGG TGCGT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145511048	ENSMUSSNP4069363	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs45657446					SNP	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:134601617 () rs orientation: forward

Symbol	Name	Function Class
Rr418973	regulatory region 418973	525 bp proximal
Rr418974	regulatory region 418974	606 bp proximal
Syt2	synaptotagmin II	Intron