rs45655479 SNP Detail

Summary

• ID
  rs45655479
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:137710619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACACACAC ATATGAGTTA
  TTGAGTGCCT ATTATGTGTC ATGCACCAAG TTGTATAAGC CCCTTATTAA TAAATACAAT
  GTAATAGAAT CATAAGAAAA TATTATCCTA GCCCACCAGG AGAAGCAGAA GGGTGGAAAT
  AATTGCTCCT GGCTAAGAAA GGAGAAGAGG GGCCGGGCAT GGTGGCGCAC GCCTTTAATC
  S
  CAACACTCGG GAGGCAGAGG TAGGTGGATT TCTGAGTTCG AGGCCAGCCT GGTCTACAAA
  GGGAGTTCCA GGACAGCCAG GGCTATACAG AGAAACCCTG TCTCGAAAAA CCAAAAAAAA
  AAAAATAATA ATAATAAGGA GAAGAGGGTC TGAGCCAAAT TTGTTCCATA AGACAACACT
  TAAGTTATTA ATTTGTTTTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147628105	ENSMUSSNP1955886	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs45655479					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137710619 () rs orientation: forward

Symbol	Name	Function Class
Rr602808	regulatory region 602808	1067 bp distal
Rr602809	regulatory region 602809	946 bp proximal
Rr602810	regulatory region 602810	1917 bp proximal