rs45654867 SNP Detail

Summary

• ID
  rs45654867
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:100825213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTGTTCT AGAGGATCTG
  GCACCGTCAC GGTGGCAAGC GCAGGGGAGG AGGCTTTTGC TCACAGGTCT CACAGTTTGA
  GACCCAGTCC ATCGCAGTGG GTTAGGTATG GCAGCCTAGT GGCTCTCAGC ACTGGCAGGG
  GTAGGAGGCA GCTTGCTCAC AGGTCTCACA GTTTGAGACC CAGTCCATCG CAGTGGGTTA
  R
  GTATGGCAGC CTAGTGGCTC TCAGCACTGG CAGGGGTAGG AGGCAGCTTG CTCACATCTG
  GGCAAGTCAA GAAGCAGAGA GCACAGTGGA ATTCGGGCAG CTAGAAAAAT CTCAAAGCAC
  CCCACCCAGC CACAGAGGGC CTTTTCCTCC AGCGAGTCTC TACCAACGAA AAGTTGACAA
  TCCTCCCCAC ACAACACCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss135542935	ENSMUSSNP3438524	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs45654867					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:100825213 () rs orientation: forward

Symbol	Name	Function Class
Rr581925	regulatory region 581925	680 bp distal
Rr581926	regulatory region 581926	939 bp distal