rs45649707 SNP Detail

Summary

• ID
  rs45649707
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:87183505 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTTTGGCA AATTTTCTTT
  TTTAGAGATA TGGTATATAT ATATATTACT CTTCCTAGGA TGGTCTTGGG ACTCAAAAAA
  GAGCTATGTC TTTCATTGCC TGTGCTACAA AACTGTGCTT CACTCCTACT CTGGGAGCCA
  CAAAGGGATT TCTCCTGGCT GTGATGTACA ATGACATTTA TGTGGCTGTC GGTAACCCTC
  Y
  GCTCTATTCT CTACTCCTAA GACTCACCTG TGGATCAAGC TCTCAGCTGG ATCTTGGTTC
  AGTGGGATGA ATTCTGGTAC AGGTAGATTG CAGACAACAC AAAGTTTATA TCACTTGCTG
  GTTCCCACCA CACCAATCAC ATCTTTTGTG ACTTCCTTGA TATTTCAGCT TGCCTGTGAA
  AACGTTTATA AACGAGATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146877430	ENSMUSSNP359223	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs45649707					SNP	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:87183505 () rs orientation: forward

Symbol	Name	Function Class
Or12a1-ps1	olfactory receptor family 12 subfamily A member 1, pseudogene 1	within coordinates