rs4223747 SNP Detail

Summary

• ID
  rs4223747
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  111
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:14965569 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTCTGCCA CGGCAGCGCA
  ATGCAAAGAG CAGACATGGC CTCTTGCTTC TCTTCACAGC CATAGGATAA TGAATACTCA
  GGCCTGTTTG TTAAAATGCT ATTTTTAAAA CCATATGAAG GTAGGATAAT TAATTACAAG
  TCCACATCAT GAGACAAACT GAAGTAACTT AGGCAAAACA GGTAAAACAG TCATAGTTTT
  R
  TGATTATAAA TGAGATGAAT GTTCACCCTT CCAAGATCTT ATATTAAAGA AAAAATTTTA
  AAAAGCTTAT ATATTTGTAG CAAAGTTATT CTTAAATATG AATTATGTTA TAACTTAGTG
  ACTTTTGATT TCTAGAGGTG TAAATGAGGA TGTAAAAATT GATATAGTTG TGATACAGAG
  TATATTTCCC TTCAGATAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss6386716	AI131712_149	TWGNF	TWGNF-Mouse	f	SNP	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs4223747					SNP	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss6386716	AI131712_149	TWGNF	TWGNF-Mouse-2	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14965569 () rs orientation: forward

Symbol	Name	Function Class
Car2	carbonic anhydrase 2	mRNA-UTR
Rr573732	regulatory region 573732	890 bp proximal
Rr573733	regulatory region 573733	1987 bp proximal