rs4138023 SNP Detail

Summary

• ID
  rs4138023
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154909288 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTA GCTCTTCCTT CAGGGCTGAC
  R
  CTTGTGTTTG CTTGTTTGTT TGTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5108793	WI_WGS_4_150274194	WI	MOUSE	f	SNP	A			G
ss148106708	ENSMUSSNP6004840	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A		A
ss321440012	CHEV_4_154198940	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs4138023					SNP	A	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154909288 () rs orientation: forward

Symbol	Name	Function Class
Rr606270	regulatory region 606270	816 bp proximal
Rr606271	regulatory region 606271	1119 bp proximal
Rr606272	regulatory region 606272	1216 bp proximal