rs4136189 SNP Detail

Summary

• ID
  rs4136189
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  109
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:104921124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGTGGCTGGT CCTTTCTACT ATGCTTTGGA AAAGTTACAC
  ACCTGTAAAT acacacaaca cacacacaca cacacacaca cacacacaca cacacacaca
  S
  agagagagag agagagagag agagagagag agagTTAAAA AAATCTGTGT TTGAATCCTG
  ATCAAATACT AAGTAGCTAT GACAACAGGC AATTTAGTTA                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss5106952	WI_WGS_2_105996598	WI	MOUSE	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs4136189					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:104921124 () rs orientation: forward

Symbol	Name	Function Class
Rr562162	regulatory region 562162	263 bp distal
Wt1os	WT1 transcription factor, opposite strand	within coordinates