rs4135957 SNP Detail

Summary

• ID
  rs4135957
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  109
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:127083087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGT TGAGCTGAGC ATGTCAACTT
  S
  AGGTTGGGAA AGAAGAGTTT CCAAA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5106720	WI_WGS_2_128221695	WI	MOUSE	f	SNP	G			C
ss45376729	mCV22836104	ABI	CRAMUS_MOUSE	f	SNP		G	C	C	G
ss147524234	ENSMUSSNP4644609	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	C		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs4135957					SNP	G	G	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127083087 () rs orientation: forward

Symbol	Name	Function Class
Ciao1	cytosolic iron-sulfur protein assembly 1	mRNA-UTR
Rr564475	regulatory region 564475	750 bp distal
Snrnp200	small nuclear ribonucleoprotein 200 (U5)	716 bp downstream